BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB033A09SP1|AL429672
(839 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1145 1054 0.0
>3x_Contig1145
Length = 5226
Score = 1054 bits (522), Expect = 0.0
Identities = 587/625 (93%)
Strand = Plus / Minus
Query: 1 cattccattcaagatcgttaagggatttggcattattaccgtgtttggagttcatgattc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2605 cattccattcaagatcgttaagggatttggcattattaccgtgtttggagttcatgattc 2546
Query: 61 catgaagaaatttgtttttgagaccagtggttaactcagttaaggtgttaccacctgata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2545 catgaagaaatttgtttttgagaccagtggttaactcagttaaggtgttaccacctgata 2486
Query: 121 aacttctattaagcgacttcaagccgctgcccaccgattgatttactattgttaacttag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2485 aacttctattaagcgacttcaagccgctgcccaccgattgatttactattgttaacttag 2426
Query: 181 aggcgatattcagaccgttttggtcgatgacacctttgtcattctgaaatactgcygaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 2425 aggcgatattcagaccgttttggtcgatgacacctttgtcattctgaaatactgctgaat 2366
Query: 241 aaccaacattgaaagtctctggatcatagtacggacgtaggatggatgaatctttgatcy 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2365 aaccaacattgaaagtctctggatcatagtacggacgtaggatggatgaatctttgatct 2306
Query: 301 ccyccattttcaacactccgaatgttgcyttttgaagtyctttctcccttgttaactcgc 360
|| ||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||
Sbjct: 2305 cctccattttcaacactccgaatgttgctttttgaagttctttctcccttgttaactcgc 2246
Query: 361 catcagtttttattgtcgtmcyagttgccacttgattatyttatttaccytgtaaatytc 420
|||||||||||||||| || | |||||| |||||||||| ||||||||| ||||||| ||
Sbjct: 2245 catcagtttttattgttgtactagttgctacttgattattttatttaccttgtaaatttc 2186
Query: 421 aagtgcmccantnctctgngaangaaaagtaanangamaatcaagcgtntatataggtaa 480
|||||| | | | ||||| ||| ||||||||| | || |||||||||| |||||||||||
Sbjct: 2185 aagtgcactatttctctgtgaatgaaaagtaatatgaaaatcaagcgtttatataggtaa 2126
Query: 481 ggggagccaaayatttcgmtcyccagacaaaggaatcaatgagtycatccatcattaatg 540
||||||| ||| |||||| || |||||||||||||||||||||| |||||||||||||||
Sbjct: 2125 ggggagcaaaatatttcgatctccagacaaaggaatcaatgagttcatccatcattaatg 2066
Query: 541 ncacacaaggmatttatcagccangaatcyatgtttatgatcccyttccttcagatcaag 600
||| |||| |||||| ||| | ||||| |||||||||||||| |||||||||||||||
Sbjct: 2065 ttacataaggaatttattagctatgaatctatgtttatgatccctttccttcagatcaag 2006
Query: 601 tmaaccttctactgccatgtgaaga 625
| ||||||||||||| |||||||||
Sbjct: 2005 taaaccttctactgcaatgtgaaga 1981
Score = 311 bits (154), Expect = 2e-84
Identities = 155/156 (99%)
Strand = Plus / Minus
Query: 684 gaatcttcaaaatcagagttattctgcggtatgctatcaaatgcagaagacgatgaaggt 743
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1922 gaatcttcaaaatcagagttattctgcggtatgctatcaaatgcagaagacgatgaaggt 1863
Query: 744 cttggctcgtttaacgatattactcgtctatttccattgaatgtgtcattcatatattta 803
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1862 cttggctcgtttaacgatattactcgtctatttccattgaatgtgtcattcatatattta 1803
Query: 804 tttcgtagcaaactggstacacgtgatgtgtttccc 839
|||||||||||||||| |||||||||||||||||||
Sbjct: 1802 tttcgtagcaaactggctacacgtgatgtgtttccc 1767
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.40 0.715 1.33
Gapped
Lambda K H
1.40 0.715 1.33
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3975
Number of Sequences: 1807
Number of extensions: 3975
Number of successful extensions: 79
Number of sequences better than 1.0e-20: 1
length of query: 839
length of database: 10,358,551
effective HSP length: 16
effective length of query: 823
effective length of database: 10,329,639
effective search space: 8501292897
effective search space used: 8501292897
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.3 bits)
S1: 12 (24.7 bits)
S2: 50 (101.4 bits)